Friday 15 February 2013

sungridengine - sunGrid cluster: qsub error "Unable to run job: hostnames may not be empty string" -



sungridengine - sunGrid cluster: qsub error "Unable to run job: hostnames may not be empty string" -

i'm submitting jobs sungrid cluster, , want log file have it's start time name. used next command:

qsub -j y -o job_`date "+%y_%m_%d_%h:%m"`.log job.sh

but got next error message:

unable read script file because of error: error! invalid alternative argument "-f"

i didn't find "-f" in script, tried replace date execution current date:

qsub -j y -o job_2014_10_23_16:36.log job.sh

but, got next error:

unable run job: hostnames may not empty string.

what can be?

i found error using colon in output file name, looking hostname:option argument. replacing colon character (e.g. underscore) fixed it:

qsub -j y -o job_2014_10_23_16_36.log job.sh

great!

sungridengine qsub

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